PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT22201
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family NAC
Protein Properties Length: 429aa    MW: 47360.8 Da    PI: 4.1104
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT22201genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.51.4e-4961331128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
               lppGfrFhPtd elv++yLk+k+ gkkl + e+i+ev++yk+ PwdLp k ++++++ ew+fF++rdkky++g+r+nrat +gyWk++gkd+++   +++ 
  EMT22201   6 LPPGFRFHPTDVELVSYYLKRKIMGKKLFV-EAISEVELYKFAPWDLPdKsCLQSKDLEWFFFCPRDKKYPKGSRTNRATPNGYWKTSGKDRTIEL-NSRI 104
               79*************************999.89**************96347777888**************************************.999* PP

       NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
               vglkktL+f++g+apkg++tdWvm ey++
  EMT22201 105 VGLKKTLIFHEGKAPKGNRTDWVMYEYKM 133
               ***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.02E-593156IPR003441NAC domain
PROSITE profilePS5100556.3986156IPR003441NAC domain
PfamPF023658.5E-267132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MAQACLPPGF RFHPTDVELV SYYLKRKIMG KKLFVEAISE VELYKFAPWD LPDKSCLQSK  60
DLEWFFFCPR DKKYPKGSRT NRATPNGYWK TSGKDRTIEL NSRIVGLKKT LIFHEGKAPK  120
GNRTDWVMYE YKMEDETLVS AGFSKDAYVL CKIFKKSGLG PRIGEQYGAP FDENEWENLD  180
VGSSIFSFAP SSGVEDPQVE SSALATAIVM QEPSAPQQSV QFSEHVNICS DEVNDAPPEI  240
DGILLDELAK FLDDSPNDDV VLPENSGLPP MSELEAQAFE INTAELYDQL AGLSQSGDMS  300
TVNFPASNGD VIENNLQQAN SGLAMDDDYI GLDDLLAPGE TFSYDFSGET FSYDLPGGSF  360
SYDLSVPNNQ FLLYPLDQST SGSHYGVGAT QSTFEASGTL PPMQPMPSTF NDMPSVSNCL  420
NPAMKDPFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-51215711169Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00583DAPTransfer from AT5G64060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB3621610.0AB362161.1 Hordeum vulgare subsp. vulgare mRNA for transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003568407.10.0PREDICTED: NAC domain-containing protein 74-like
TrEMBLM8CG860.0M8CG86_AEGTA; NAC domain-containing protein 78
STRINGBRADI2G24790.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47313664
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.12e-83NAC domain containing protein 103